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In Vitro Transcriptome Analysis of Cobalt Boride Nanoparticles on Human Pulmonary Alveolar Cells

dc.authorscopusid57194055689
dc.authorscopusid6602799699
dc.authorscopusid57520408900
dc.authorscopusid56452567600
dc.authorscopusid57218718801
dc.authorscopusid6701531692
dc.authorscopusid24484791900
dc.authorwosidMardinoglu, Adil/Aas-6360-2021
dc.authorwosidÖzdemir, Özlem/Aab-5862-2020
dc.authorwosidArslan, Mehmet Enes/I-5823-2014
dc.authorwosidArslan, Mehmet Enes/I-5823-2014
dc.authorwosidTürkez, Hasan/Aaq-4905-2020
dc.authorwosidSahin, Irfan/Afa-9360-2022
dc.authorwosidHacimuftuoglu, Ahmet/U-9109-2018
dc.contributor.authorArslan, Mehmet Enes
dc.contributor.authorTatar, Arzu
dc.contributor.authorYildirim, Ozge Caglar
dc.contributor.authorŞahin, İrfan Oğuz
dc.contributor.authorOzdemir, Ozlem
dc.contributor.authorSonmez, Erdal
dc.contributor.authorTurkez, Hasan
dc.contributor.authorIDArslan, Mehmet Enes/0000-0002-1600-2305
dc.contributor.authorIDÖzdemir, Özlem/0000-0002-5472-8174
dc.contributor.authorIDÇağlar, Özge/0000-0003-1412-8411
dc.contributor.authorIDMardinoglu, Adil/0000-0002-4254-6090
dc.contributor.authorIDAçıkyıldız, Metin/0000-0002-0280-5174
dc.date.accessioned2025-12-11T01:35:11Z
dc.date.issued2022
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Arslan, Mehmet Enes; Yildirim, Ozge Caglar; Ozdemir, Ozlem] Erzurum Tech Univ, Fac Sci, Dept Mol Biol & Genet, TR-25050 Erzurum, Turkey; [Tatar, Arzu] Ataturk Univ, Fac Med, Dept Otorhinolaryngol, TR-25240 Erzurum, Turkey; [Sahin, Irfan Oguz] Ondokuz Mayis Univ, Fac Med, Dept Pediat, Pediat Cardiol, TR-55139 Samsun, Turkey; [Sonmez, Erdal] Ataturk Univ, Grad Sch Nat & Appl Sci, Dept Nanosci & Nanoengn, Adv Mat Res Lab, TR-25240 Erzurum, Turkey; [Hacimuftuoglu, Ahmet] Ataturk Univ, Med Fac, Dept Med Pharmacol, TR-25240 Erzurum, Turkey; [Acikyildiz, Metin] Kilis 7 Aralik Univ, Dept Chem, Fac Sci, TR-79000 Kilis, Turkey; [Geyikoglu, Fatime] Ataturk Univ, Fac Arts & Sci, Dept Biol, TR-25240 Erzurum, Turkey; [Mardinoglu, Adil] KTH Royal Inst Technol, Sci Life Lab, SE-17121 Stockholm, Sweden; [Mardinoglu, Adil] Kings Coll London, Fac Dent Oral & Craniofacial Sci, Ctr Host Microbiome Interact, London SE1 9RT, England; [Turkez, Hasan] Ataturk Univ, Fac Med, Dept Med Biol, TR-25240 Erzurum, Turkeyen_US
dc.descriptionArslan, Mehmet Enes/0000-0002-1600-2305; Özdemir, Özlem/0000-0002-5472-8174; Çağlar, Özge/0000-0003-1412-8411; Mardinoglu, Adil/0000-0002-4254-6090; Açıkyıldız, Metin/0000-0002-0280-5174en_US
dc.description.abstractNanobiotechnology influences many different areas, including the medical, food, energy, clothing, and cosmetics industries. Considering the wide usage of nanomaterials, it is necessary to investigate the toxicity potentials of specific nanosized molecules. Boron-containing nanoparticles (NPs) are attracting much interest from scientists due to their unique physicochemical properties. However, there is limited information concerning the toxicity of boron-containing NPs, including cobalt boride (Co2B) NPs. Therefore, in this study, Co2B NPs were characterized using X-ray crystallography (XRD), transmission electron microscope (TEM), scanning electron microscope (SEM), and energy-dispersive X-ray spectroscopy (EDX) techniques. Then, we performed 3-(4,5-dimethyl-thiazol-2-yl) 2,5-diphenyltetrazolium bromide (MTT), lactate dehydrogenase (LDH) release, and neutral red (NR) assays for assessing cell viability against Co2B NP exposure on cultured human pulmonary alveolar epithelial cells (HPAEpiC). In addition, whole-genome microarray analysis was carried out to reveal the global gene expression differentiation of HPAEpiC cells after Co2B NP application. The cell viability tests unveiled an IC50 value for Co2B NPs of 310.353 mg/L. The results of our microarray analysis displayed 719 gene expression differentiations (FC >= 2) among the analyzed 40,000 genes. The performed visualization and integrated discovery (DAVID) analysis revealed that there were interactions between various gene pathways and administration of the NPs. Based on gene ontology biological processes analysis, we found that the P53 signaling pathway, cell cycle, and cancer-affecting genes were mostly affected by the Co2B NPs. In conclusion, we suggested that Co2B NPs would be a safe and effective nanomolecule for industrial applications, particularly for medical purposes.en_US
dc.description.sponsorshipThe National Boron Research Institute (BOREN) [Ç0391] Funding Source: Medlineen_US
dc.description.woscitationindexScience Citation Index Expanded
dc.identifier.doi10.3390/ma15238683
dc.identifier.issn1996-1944
dc.identifier.issue23en_US
dc.identifier.pmid36500178
dc.identifier.scopus2-s2.0-85143783691
dc.identifier.scopusqualityQ2
dc.identifier.urihttps://doi.org/10.3390/ma15238683
dc.identifier.urihttps://hdl.handle.net/20.500.12712/44686
dc.identifier.volume15en_US
dc.identifier.wosWOS:000896211800001
dc.identifier.wosqualityQ2
dc.language.isoenen_US
dc.publisherMDPIen_US
dc.relation.ispartofMaterialsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectCobalt Boride Nanoparticlesen_US
dc.subjectToxicogenomicsen_US
dc.subjectHuman Pulmonary Alveolar Epithelial Cellsen_US
dc.subjectPathway Analysisen_US
dc.subjectIn Vitroen_US
dc.subjectCytotoxicityen_US
dc.titleIn Vitro Transcriptome Analysis of Cobalt Boride Nanoparticles on Human Pulmonary Alveolar Cellsen_US
dc.typeArticleen_US
dspace.entity.typePublication

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