Publication: In Vitro Transcriptome Analysis of Cobalt Boride Nanoparticles on Human Pulmonary Alveolar Cells
| dc.authorscopusid | 57194055689 | |
| dc.authorscopusid | 6602799699 | |
| dc.authorscopusid | 57520408900 | |
| dc.authorscopusid | 56452567600 | |
| dc.authorscopusid | 57218718801 | |
| dc.authorscopusid | 6701531692 | |
| dc.authorscopusid | 24484791900 | |
| dc.authorwosid | Mardinoglu, Adil/Aas-6360-2021 | |
| dc.authorwosid | Özdemir, Özlem/Aab-5862-2020 | |
| dc.authorwosid | Arslan, Mehmet Enes/I-5823-2014 | |
| dc.authorwosid | Arslan, Mehmet Enes/I-5823-2014 | |
| dc.authorwosid | Türkez, Hasan/Aaq-4905-2020 | |
| dc.authorwosid | Sahin, Irfan/Afa-9360-2022 | |
| dc.authorwosid | Hacimuftuoglu, Ahmet/U-9109-2018 | |
| dc.contributor.author | Arslan, Mehmet Enes | |
| dc.contributor.author | Tatar, Arzu | |
| dc.contributor.author | Yildirim, Ozge Caglar | |
| dc.contributor.author | Şahin, İrfan Oğuz | |
| dc.contributor.author | Ozdemir, Ozlem | |
| dc.contributor.author | Sonmez, Erdal | |
| dc.contributor.author | Turkez, Hasan | |
| dc.contributor.authorID | Arslan, Mehmet Enes/0000-0002-1600-2305 | |
| dc.contributor.authorID | Özdemir, Özlem/0000-0002-5472-8174 | |
| dc.contributor.authorID | Çağlar, Özge/0000-0003-1412-8411 | |
| dc.contributor.authorID | Mardinoglu, Adil/0000-0002-4254-6090 | |
| dc.contributor.authorID | Açıkyıldız, Metin/0000-0002-0280-5174 | |
| dc.date.accessioned | 2025-12-11T01:35:11Z | |
| dc.date.issued | 2022 | |
| dc.department | Ondokuz Mayıs Üniversitesi | en_US |
| dc.department-temp | [Arslan, Mehmet Enes; Yildirim, Ozge Caglar; Ozdemir, Ozlem] Erzurum Tech Univ, Fac Sci, Dept Mol Biol & Genet, TR-25050 Erzurum, Turkey; [Tatar, Arzu] Ataturk Univ, Fac Med, Dept Otorhinolaryngol, TR-25240 Erzurum, Turkey; [Sahin, Irfan Oguz] Ondokuz Mayis Univ, Fac Med, Dept Pediat, Pediat Cardiol, TR-55139 Samsun, Turkey; [Sonmez, Erdal] Ataturk Univ, Grad Sch Nat & Appl Sci, Dept Nanosci & Nanoengn, Adv Mat Res Lab, TR-25240 Erzurum, Turkey; [Hacimuftuoglu, Ahmet] Ataturk Univ, Med Fac, Dept Med Pharmacol, TR-25240 Erzurum, Turkey; [Acikyildiz, Metin] Kilis 7 Aralik Univ, Dept Chem, Fac Sci, TR-79000 Kilis, Turkey; [Geyikoglu, Fatime] Ataturk Univ, Fac Arts & Sci, Dept Biol, TR-25240 Erzurum, Turkey; [Mardinoglu, Adil] KTH Royal Inst Technol, Sci Life Lab, SE-17121 Stockholm, Sweden; [Mardinoglu, Adil] Kings Coll London, Fac Dent Oral & Craniofacial Sci, Ctr Host Microbiome Interact, London SE1 9RT, England; [Turkez, Hasan] Ataturk Univ, Fac Med, Dept Med Biol, TR-25240 Erzurum, Turkey | en_US |
| dc.description | Arslan, Mehmet Enes/0000-0002-1600-2305; Özdemir, Özlem/0000-0002-5472-8174; Çağlar, Özge/0000-0003-1412-8411; Mardinoglu, Adil/0000-0002-4254-6090; Açıkyıldız, Metin/0000-0002-0280-5174 | en_US |
| dc.description.abstract | Nanobiotechnology influences many different areas, including the medical, food, energy, clothing, and cosmetics industries. Considering the wide usage of nanomaterials, it is necessary to investigate the toxicity potentials of specific nanosized molecules. Boron-containing nanoparticles (NPs) are attracting much interest from scientists due to their unique physicochemical properties. However, there is limited information concerning the toxicity of boron-containing NPs, including cobalt boride (Co2B) NPs. Therefore, in this study, Co2B NPs were characterized using X-ray crystallography (XRD), transmission electron microscope (TEM), scanning electron microscope (SEM), and energy-dispersive X-ray spectroscopy (EDX) techniques. Then, we performed 3-(4,5-dimethyl-thiazol-2-yl) 2,5-diphenyltetrazolium bromide (MTT), lactate dehydrogenase (LDH) release, and neutral red (NR) assays for assessing cell viability against Co2B NP exposure on cultured human pulmonary alveolar epithelial cells (HPAEpiC). In addition, whole-genome microarray analysis was carried out to reveal the global gene expression differentiation of HPAEpiC cells after Co2B NP application. The cell viability tests unveiled an IC50 value for Co2B NPs of 310.353 mg/L. The results of our microarray analysis displayed 719 gene expression differentiations (FC >= 2) among the analyzed 40,000 genes. The performed visualization and integrated discovery (DAVID) analysis revealed that there were interactions between various gene pathways and administration of the NPs. Based on gene ontology biological processes analysis, we found that the P53 signaling pathway, cell cycle, and cancer-affecting genes were mostly affected by the Co2B NPs. In conclusion, we suggested that Co2B NPs would be a safe and effective nanomolecule for industrial applications, particularly for medical purposes. | en_US |
| dc.description.sponsorship | The National Boron Research Institute (BOREN) [Ç0391] Funding Source: Medline | en_US |
| dc.description.woscitationindex | Science Citation Index Expanded | |
| dc.identifier.doi | 10.3390/ma15238683 | |
| dc.identifier.issn | 1996-1944 | |
| dc.identifier.issue | 23 | en_US |
| dc.identifier.pmid | 36500178 | |
| dc.identifier.scopus | 2-s2.0-85143783691 | |
| dc.identifier.scopusquality | Q2 | |
| dc.identifier.uri | https://doi.org/10.3390/ma15238683 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.12712/44686 | |
| dc.identifier.volume | 15 | en_US |
| dc.identifier.wos | WOS:000896211800001 | |
| dc.identifier.wosquality | Q2 | |
| dc.language.iso | en | en_US |
| dc.publisher | MDPI | en_US |
| dc.relation.ispartof | Materials | en_US |
| dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Cobalt Boride Nanoparticles | en_US |
| dc.subject | Toxicogenomics | en_US |
| dc.subject | Human Pulmonary Alveolar Epithelial Cells | en_US |
| dc.subject | Pathway Analysis | en_US |
| dc.subject | In Vitro | en_US |
| dc.subject | Cytotoxicity | en_US |
| dc.title | In Vitro Transcriptome Analysis of Cobalt Boride Nanoparticles on Human Pulmonary Alveolar Cells | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication |
